Find out what the most frequent alterations are when dealing with large data sets and if they statistically significant copy number alterations.
Learn this little trick to obtaining the number of tests performed for FDR correction when using the comparisons tool in Nexus Copy Number.
This review provides an alternate approach to indentifying driver alterations, by classifying individual tumors based on their functional events.
CoNIFER can be used to discover CNVs that might be missed by standard practices. Look at our considerations when evaluating the CoNIFER algorithm.
Take a look at how Nexus Copy Number handles the different “Raw Data” and the three steps to analyzing the data.