This webinar is geared towards those interested in performing integrated analysis and visualization of genomic changes (copy number, sequence variants, and gene expression).
Andrea O'Hara, Ph.D.
Field Application Scientist
Nexus Copy Number 8.0 analyzes DNA copy number variants and sequence variants, as well as the option to integrate associated RNA expression results on both the aggregate and single sample levels. Cross data integration for individual samples offers additional strength and validity to findings initially uncovered through traditional aggregate analysis. In this webinar, we will
- Analyze copy number, sequence variant and RNA-Seq data from TCGA for a kidney chromophobe (KICH) cohort.
- Present downstream aggregate analysis and concordance analysis as a means to identify subgroups within the cohort.
- Integrate with RNA-Seq expression data from each subgroup to find statistically significant correlations with these copy number alterations to identify potential driver genes of interest.
- Evaluate the overall impact of these changes on survival.